MBE Advance Access published online on October 29, 2008
Molecular Biology and Evolution, doi:10.1093/molbev/msn246
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Research Article |
The multiple evolutionary histories of dioxygen reductases: implications for the origin and evolution of aerobic respiration
1 Université de Provence Aix-Marseille I, France
2 Université de la Méditerranée Aix-Marseille II, France
3 Laboratoire de Chimie Bactérienne CNRS UPR9043, Marseille, France
4 Unité de Biologie Moléculaire chez les Extremophiles (BMGE), Institut Pasteur, Paris, France
* Corresponding authors Céline Brochier-Armanet, celine.brochier{at}ibsm.cnrs-mrs.fr, Laboratoire de Chimie Bacterienne (CNRS - UPR9043), |Institut de Biologie Structurale et de Microbiologie, 31 chemin Joseph Aiguier, 13402 Marseille Cedex 20, FRANCE, Phone 33491164508, Fax 33491718914, Simonetta Gribaldo, simo{at}pasteur.fr, Biologie Moléculaire du Gène chez les Extrêmophiles (BMGE), Département de Microbiologie, Institut Pasteur, 28 rue du Dr Roux, 75724 Paris Cedex 15
Received for publication July 17, 2008. Revision received October 10, 2008. Accepted for publication October 22, 2008.
Understanding the origin and evolution of cellular processes is fundamental to understand how biological activity has shaped the history of our planet. Among these, aerobic respiration is probably one of the most debated. We have applied a phylogenomics approach to investigate the origin and evolution of dioxygen reductases (O2Red), the key enzymes of aerobic respiratory chains. The distribution and phylogenetic analysis of the four types of O2Red (Cyt-bd, and the A-, B- and C- families of haem copper O2Red) from 673 complete bacterial and archaeal genomes shows that these enzymes have very different evolutionary histories: Cyt-bd are of bacterial origin and were transferred to a few archaea; C-O2Red are of proteobacterial origin and were transferred to a few other bacteria; B-O2Red are of archaeal origin and were transferred to a few bacteria; A-O2Red are the most ancient dioxygen reductases and were already present prior to the divergence of major present-day bacterial and archaeal phyla, thus before the emergence of Cyanobacteria and oxygenic photosynthesis. Implications for the origin and the evolution of aerobic respiration are discussed.
Key Words: Dioxygen reductases Aerobic respiration Horizontal gene transfer Phylogenomics Cytochrome c oxidases Cytochrome bd
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