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MBE Advance Access published online on October 19, 2006

Molecular Biology and Evolution, doi:10.1093/molbev/msl151
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© The Author 2006. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oxfordjournals.org
Accepted October 5, 2006

Research Article

Independent Wheat B and G Genome Origins in Outcrossing Aegilops Progenitor Haplotypes

B. Kilian 1, H. Özkan 2, O. Deusch 3, S. Effgen 4, A. Brandolini 5, J. Kohl 6, W. Martin 3, and F. Salamini 7 *

1 Max-Planck-Institute for Plant Breeding Research, Köln, Germany; Institute of Botany III, Heinrich-Heine-Universität Düsseldorf, Germany
2 Department of Field Crops, Faculty of Agriculture, University of Cukurova, Adana, Turkey
3 Institute of Botany III, Heinrich-Heine-Universität Düsseldorf, Germany
4 Max-Planck-Institute for Plant Breeding Research, Köln, Germany
5 Istituto Sperimentale per la Cerealicoltura - CRA, S. Angelo Lodigiano, Italy
6 Institute of Bioinformatics, Heinrich-Heine-Universität Düsseldorf, Germany
7 Max-Planck-Institute for Plant Breeding Research, Köln, Germany; Fondazione Parco Tecnologico Padano, Lodi, Italy

* To whom correspondence should be addressed.
F. Salamini, E-mail: francesco.salamini{at}tecnoparco.org


   Abstract

The origin of modern wheats involved alloploidization among related genomes. To determine if Aegilops speltoides was the donor of the B and G genomes in AABB and AAGG tetraploids, we used a three-tiered approach. Using 70 AFLP loci, we sampled molecular diversity among 480 wheat lines from their natural habitats encompassing all S genome Aegilops, the putative progenitors of wheat B and G genomes. Fifty-nine Aegilops representative for S genome diversity were compared at 375 AFLP loci to diploid, tetraploid, and 11 nullitetrasomic T. aestivum wheat lines. B genome-specific markers allowed to pin the origin of the B genome to S chromosomes of Aegilops speltoides, while excluding other lineages. The outbreeding nature of Ae. speltoides influences its molecular diversity and bears upon inferences of B and G genome origin. Haplotypes at nuclear and chloroplast loci ACC1, G6PDH, GPT, PGK1, Q, VRN1 and ndhF for ~70 Aegilops and Triticum lines (0.73 Mb sequenced) reveal both B and G genomes of polyploid wheats as unique samples of Ae. speltoides haplotype diversity. This have been sequestered by the AABB T. dicoccoides and AAGG T. araraticum lineages during their independent origins.

Keywords: molecular evolution; Triticum; Aegilops; hybridization; alloploidization; AFLPs.
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