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MBE Advance Access originally published online on November 10, 2006
Molecular Biology and Evolution 2007 24(2):436-448; doi:10.1093/molbev/msl173
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© The Author 2006. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oxfordjournals.org

Research Articles

Origin and Expansion of Haplogroup H, the Dominant Human Mitochondrial DNA Lineage in West Eurasia: The Near Eastern and Caucasian Perspective

U Roostalu1,*, I Kutuev*,{dagger}, E-L Loogväli*, E Metspalu*, K Tambets*, M Reidla*, EK Khusnutdinova{dagger}, E Usanga{ddagger}, T Kivisild* and R Villems*

* Department of Evolutionary Biology, Institute of Molecular and Cell Biology, University of Tartu and Estonian Biocentre, Tartu, Estonia
{dagger} Institute of Biochemistry and Genetics, Ufa Research Center, Russian Academy of Sciences, Ufa, Russia
{ddagger} Department of Hematology, University of Calabar, Calabar, Nigeria

E-mail: evall{at}ut.ee.

Accepted for publication November 3, 2006.

More than a third of the European pool of human mitochondrial DNA (mtDNA) is fragmented into a number of subclades of haplogroup (hg) H, the most frequent hg throughout western Eurasia. Although there has been considerable recent progress in studying mitochondrial genome variation in Europe at the complete sequence resolution, little data of comparable resolution is so far available for regions like the Caucasus and the Near and Middle East—areas where most of European genetic lineages, including hg H, have likely emerged. This gap in our knowledge causes a serious hindrance for progress in understanding the demographic prehistory of Europe and western Eurasia in general. Here we describe the phylogeography of hg H in the populations of the Near East and the Caucasus. We have analyzed 545 samples of hg H at high resolution, including 15 novel complete mtDNA sequences. As in Europe, most of the present-day Near Eastern–Caucasus area variants of hg H started to expand after the last glacial maximum (LGM) and presumably before the Holocene. Yet importantly, several hg H subclades in Near East and Southern Caucasus region coalesce to the pre-LGM period. Furthermore, irrespective of their common origin, significant differences between the distribution of hg H sub-hgs in Europe and in the Near East and South Caucasus imply limited post-LGM maternal gene flow between these regions. In a contrast, the North Caucasus mitochondrial gene pool has received an influx of hg H variants, arriving from the Ponto-Caspian/East European area.

Key Words: human mitochondrial DNA • haplogroup • population genetics • human evolution • Near East • Caucasus

1 Present address: Institute for Toxicology and Genetics, Research Centre Karlsruhe, Germany.

Lisa Matisoo-Smith, Associate Editor


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