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MBE Advance Access originally published online on July 26, 2006
Molecular Biology and Evolution 2006 23(10):1879-1890; doi:10.1093/molbev/msl070
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© The Author 2006. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oxfordjournals.org

Research Article

Recent Evolution of the Human Pathogen Cryptococcus neoformans by Intervarietal Transfer of a 14-Gene Fragment

Laura A. Kavanaugh, James A. Fraser and Fred S. Dietrich

Department of Molecular Genetics and Microbiology, Duke University Medical Center

E-mail: dietr003{at}mc.duke.edu.

The availability of the whole-genome sequence from the 2 known varieties of the human pathogenic fungus Cryptococcus neoformans provides an opportunity to study the relative contribution of divergence and introgression during the process of speciation in a genetically tractable organism. At the genomic level, these varieties are nearly completely syntenic, share ~85–90% nucleotide identity, and are believed to have diverged ~18 MYA. Via a comparative genomic approach, we identified a 14-gene region (~40 kb) that is nearly identical between the 2 varieties that resulted from a nonreciprocal transfer event from var. grubii to var. neoformans ~2 MYA. The majority of clinical and environmental var. neoformans strains from around the world contain this sequence obtained from var. grubii. This introgression event likely occurred via an incomplete intervarietal sexual cycle, creating a hybrid intermediate where mobile elements common to both lineages mediated the exchange. The subsequent duplication in laboratory strains of a fragment of this same genomic region supports evolutionary theories that instabilities in subtelomeric regions promote adaptive evolution through gene amplification and subsequent adaptation. Along with a more ancient predicted transfer event in C. neoformans and a recently reported example from Saccharomyces cerevisiae, these data indicate that DNA exchange between closely related sympatric varieties or species may be a recurrent theme in the evolution of fungal species. It further suggests that although evolutionary divergence is the primary force driving speciation, rare introgression events also play a potentially important role.

Key Words: Cryptococcus neoformans • segmental duplication • parasexual • subtelomeric • introgression • transposons


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X. Lin, K. Nielsen, S. Patel, and J. Heitman
Impact of Mating Type, Serotype, and Ploidy on the Virulence of Cryptococcus neoformans
Infect. Immun., July 1, 2008; 76(7): 2923 - 2938.
[Abstract] [Full Text] [PDF]



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