Molecular Biology and Evolution, Vol 14, 30-39, Copyright © 1997 by Society for Molecular Biology and Evolution
JR Macey, A Larson, NB Ananjeva and TJ Papenfuss
Presence of the dihydrouridine (D) stem in the mitochondrial cysteine tRNA
is unusually variable among lepidosaurian reptiles. Phylogenetic and
comparative analyses of cysteine tRNA gene sequences identify eight
parallel losses of the D-stem, resulting in D-arm replacement loops.
Sampling within the monophyletic Acrodonta provides no evidence for
reversal. Slipped-strand mispairing of noncontiguous repeated sequences
during replication or direct replication slippage can explain repeats
observed within cysteine tRNAs that contain a D-arm replacement loop. These
two mechanisms involving replication slippage can account for the loss of
the cysteine tRNA D-stem in several lepidosaurian lineages, and may
represent general mechanisms by which the secondary structures of
mitochondrial tRNAs are altered.
ORIGINAL ARTICLE
Replication slippage may cause parallel evolution in the secondary structures of mitochondrial transfer RNAs
Department of Biology, Washington University, St. Louis, Missouri 63130, USA.
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