Skip Navigation

Erratum for Porto et al., Mol Biol Evol 22 (3) 630-638.
Molecular Biology and Evolution 2005 22(4):1156; doi:10.1093/molbev/msi116
This Article
Right arrow Extract Freely available
Right arrow FREE Full Text (PDF) Freely available
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in ISI Web of Science
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrow Search for citing articles in:
ISI Web of Science (1)
Right arrowRequest Permissions
Google Scholar
Right arrow Articles by Porto, M.
Right arrow Articles by Bastolla, U.
Right arrow Search for Related Content
PubMed
Right arrow Articles by Porto, M.
Right arrow Articles by Bastolla, U.
Social Bookmarking
Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

© Oxford University Press. 2005. All rights reserved. For permissions, please e-mail: journals.permissions@oupjournals.org

Erratum

Prediction of Site-Specific Amino Acid Distributions and Limits of Divergent Evolutionary Changes in Protein Sequences

Markus Porto, H. Eduardo Roman, Michele Vendruscolo and Ugo Bastolla

doi:10.1093/molbev/msi048

Mol. Biol. Evol. 22:630–638. 2005

Figures 1 and 3 should have appeared as shown below. The publisher regrets the error.



View larger version (16K):
[in this window]
[in a new window]
  		FIG. 1.— "Boltzmann parameter" ßi as a function of the scaled principal eigenvector component ci/<c> as obtained by the SCN model for ribonuclease (PDB id. 7rsa). The line shows the analytical prediction given by equation (7), obtained using the mean hydrophobicity <[h]evol> = 0.108 and the variance <> – <[h]evol>2 = 0.0077 as observed in the simulations of the SCN model. The dashed part of the curve indicates the forbidden area ci < 0. The inset exemplifies –ln[{pi}i(a)] vs. hydrophobicity of amino acid a, as obtained from simulations of the SCN model for ribonuclease at protein position i = 50 (with c50/<c> = 0.124), yielding ß50 = 4.92.

 


View larger version (14K):
[in this window]
[in a new window]
  		FIG. 3.— "Boltzmann parameter" as a function of the scaled principal eigenvector component ci/<c> as obtained by analyzing a subset of 404 non-redundant single-domain globular structures of the PDB. The line shows the analytical prediction given by equation (9), obtained using the mean hydrophobicity <[h]PDB> = 0.128 and the variance <> – <[h]PDB>2 = 0.009 as obtained from this set. The dashed part of the curve indicates the forbidden area ci < 0. The inset exemplifies –ln[{pi}(a)] vs. hydrophobicity of amino acid a, as obtained from protein sequences in the PDB at positions with ci/<c> [2.45, 2.5], yielding ß = –4.53.

 

Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?



This Article
Right arrow Extract Freely available
Right arrow FREE Full Text (PDF) Freely available
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in ISI Web of Science
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrow Search for citing articles in:
ISI Web of Science (1)
Right arrowRequest Permissions
Google Scholar
Right arrow Articles by Porto, M.
Right arrow Articles by Bastolla, U.
Right arrow Search for Related Content
PubMed
Right arrow Articles by Porto, M.
Right arrow Articles by Bastolla, U.
Social Bookmarking
Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?