Molecular Biology and Evolution, Vol 4, 406-425, Copyright © 1987 by Society for Molecular Biology and Evolution
N Saitou and M Nei
A new method called the neighbor-joining method is proposed for
reconstructing phylogenetic trees from evolutionary distance data. The
principle of this method is to find pairs of operational taxonomic units
(OTUs [= neighbors]) that minimize the total branch length at each stage of
clustering of OTUs starting with a starlike tree. The branch lengths as
well as the topology of a parsimonious tree can quickly be obtained by
using this method. Using computer simulation, we studied the efficiency of
this method in obtaining the correct unrooted tree in comparison with that
of five other tree-making methods: the unweighted pair group method of
analysis, Farris's method, Sattath and Tversky's method, Li's method, and
Tateno et al.'s modified Farris method. The new, neighbor-joining method
and Sattath and Tversky's method are shown to be generally better than the
other methods.
ORIGINAL ARTICLE
The neighbor-joining method: a new method for reconstructing phylogenetic trees
Center for Demographic and Population Genetics, University of Texas Health Science Center, Houston 77225.
CiteULike 
Connotea 
Del.icio.us What's this?
This article has been cited by other articles:
|
|
 |
|
  S. Yu. Kovalev, D. N. Chernykh, V. S. Kokorev, T. E. Snitkovskaya, and V. V. Romanenko Origin and distribution of tick-borne encephalitis virus strains of the Siberian subtype in the Middle Urals, the north-west of Russia and the Baltic countries J. Gen. Virol., December 1, 2009; 90(12): 2884 - 2892. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 A. Nunes, M. J. Borrego, B. Nunes, C. Florindo, and J. P. Gomes Evolutionary Dynamics of ompA, the Gene Encoding the Chlamydia trachomatis Key Antigen J. Bacteriol., December 1, 2009; 191(23): 7182 - 7192. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 S. Wertz, C. E. Dandie, C. Goyer, J. T. Trevors, and C. L. Patten Diversity of nirK Denitrifying Genes and Transcripts in an Agricultural Soil Appl. Envir. Microbiol., December 1, 2009; 75(23): 7365 - 7377. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
K. Wasmund, K. A. Burns, D. I. Kurtboke, and D. G. Bourne Novel Alkane Hydroxylase Gene (alkB) Diversity in Sediments Associated with Hydrocarbon Seeps in the Timor Sea, Australia Appl. Envir. Microbiol., December 1, 2009; 75(23): 7391 - 7398. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 S. Maksimovic, T. A. Cook, and E. K. Buschbeck Spatial distribution of opsin-encoding mRNAs in the tiered larval retinas of the sunburst diving beetle Thermonectus marmoratus (Coleoptera: Dytiscidae) J. Exp. Biol., December 1, 2009; 212(23): 3781 - 3794. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 V. Campbell and F.-J. Lapointe The Use and Validity of Composite Taxa in Phylogenetic Analysis Syst Biol, December 1, 2009; 58(6): 560 - 572. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 S. G. Davila, M. G. Gil, P. Resino-Talavan, and J. L. Campo Evaluation of diversity between different Spanish chicken breeds, a tester line, and a White Leghorn population based on microsatellite markers Poult. Sci., December 1, 2009; 88(12): 2518 - 2525. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 Y. Ogino, H. Katoh, S. Kuraku, and G. Yamada Evolutionary History and Functional Characterization of Androgen Receptor Genes in Jawed Vertebrates Endocrinology, December 1, 2009; 150(12): 5415 - 5427. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 C. Blouin, S. Perry, A. Lavell, E. Susko, and A. J. Roger Reproducing the manual annotation of multiple sequence alignments using a SVM classifier Bioinformatics, December 1, 2009; 25(23): 3093 - 3098. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 Wuritu, Y. Ozawa, Gaowa, F. Kawamori, T. Masuda, T. Masuzawa, H. Fujita, and N. Ohashi Structural analysis of a p44/msp2 expression site of Anaplasma phagocytophilum in naturally infected ticks in Japan J. Med. Microbiol., December 1, 2009; 58(12): 1638 - 1644. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 C. Wang, C. Yang, C. Gao, and Y. Wang Cloning and expression analysis of 14 lipid transfer protein genes from Tamarix hispida responding to different abiotic stresses Tree Physiol, December 1, 2009; 29(12): 1607 - 1619. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 A. Kato, M.-H. Chang, Y. Kurita, T. Nakada, M. Ogoshi, T. Nakazato, H. Doi, S. Hirose, and M. F. Romero Identification of renal transporters involved in sulfate excretion in marine teleost fish Am J Physiol Regulatory Integrative Comp Physiol, December 1, 2009; 297(6): R1647 - R1659. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 J. Wu and E. Susko General Heterotachy and Distance Method Adjustments Mol. Biol. Evol., December 1, 2009; 26(12): 2689 - 2697. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 A. Yoshida, T. Suzaki, W. Tanaka, and H.-Y. Hirano The homeotic gene long sterile lemma (G1) specifies sterile lemma identity in the rice spikelet PNAS, November 24, 2009; 106(47): 20103 - 20108. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 D. Hirose, T. Shirouzu, M. Hirota, T. Ohtsuka, Y. Senga, M. Du, A. Shimono, and X. Zhang Species richness and species composition of fungal communities associated with cellulose decomposition at different altitudes on the Tibetan Plateau J Plant Ecol, November 20, 2009; (2009) rtp028v1. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 H.-L. Chen, C. F. Li, A. Grigorian, W. Tian, and M. Demetriou T Cell Receptor Signaling Co-regulates Multiple Golgi Genes to Enhance N-Glycan Branching J. Biol. Chem., November 20, 2009; 284(47): 32454 - 32461. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
B. V. Lowder, C. M. Guinane, N. L. Ben Zakour, L. A. Weinert, A. Conway-Morris, R. A. Cartwright, A. J. Simpson, A. Rambaut, U. Nubel, and J. R. Fitzgerald Recent human-to-poultry host jump, adaptation, and pandemic spread of Staphylococcus aureus PNAS, November 17, 2009; 106(46): 19545 - 19550. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
C. S. Pereira, A. K. de Regt, P. H. Brito, S. T. Miller, and K. B. Xavier Identification of Functional LsrB-Like Autoinducer-2 Receptors J. Bacteriol., November 15, 2009; 191(22): 6975 - 6987. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 P. Kahlem and S. J. Newfeld Informatics approaches to understanding TGF{beta} pathway regulation Development, November 15, 2009; 136(22): 3729 - 3740. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. M. Rodriguez, M. D. Golemba, R. H. Campos, K. Trono, and L. R. Jones Bovine leukemia virus can be classified into seven genotypes: evidence for the existence of two novel clades J. Gen. Virol., November 1, 2009; 90(11): 2788 - 2797. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 S.-C. Chang, M.-C. Wu, W.-M. Chen, Y.-H. Tsai, and T.-M. Lee Chitinilyticum litopenaei sp. nov., isolated from a freshwater shrimp pond, and emended description of the genus Chitinilyticum Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2651 - 2655. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
T. Irisawa and S. Okada Lactobacillus sucicola sp. nov., a motile lactic acid bacterium isolated from oak tree (Quercus sp.) sap Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2662 - 2665. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
I. D. Wagner, S. Ahmed, W. Zhao, C. L. Zhang, C. S. Romanek, M. Rohde, and J. Wiegel Caldanaerovirga acetigignens gen. nov., sp. nov., an anaerobic xylanolytic, alkalithermophilic bacterium isolated from Trego Hot Spring, Nevada, USA Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2685 - 2691. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
H.-F. Li, J.-H. Qu, J.-S. Yang, Z.-J. Li, and H.-L. Yuan Paracoccus chinensis sp. nov., isolated from sediment of a reservoir Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2670 - 2674. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
Y.-S. Oh, H.-J. Lim, I.-T. Cha, W.-T. Im, J.-S. Yoo, U. G. Kang, S.-K. Rhee, and D.-H. Roh Roseovarius halotolerans sp. nov., isolated from deep seawater Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2718 - 2723. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
A. Akaracharanya, W. Lorliam, S. Tanasupawat, K. C. Lee, and J.-S. Lee Paenibacillus cellulositrophicus sp. nov., a cellulolytic bacterium from Thai soil Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2680 - 2684. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
H. J. Lee, S.-L. Cho, M. Y. Jung, T. H. Van Nguyen, Y.-C. Jung, H. K. Park, V. P. Le, and W. Kim Corynebacterium doosanense sp. nov., isolated from activated sludge Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2734 - 2737. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
Y.-G. Chen, Y.-X. Wang, Y.-Q. Zhang, S.-K. Tang, Z.-X. Liu, H.-D. Xiao, L.-H. Xu, X.-L. Cui, and W.-J. Li Nocardiopsis litoralis sp. nov., a halophilic marine actinomycete isolated from a sea anemone Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2708 - 2713. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
M. K. Kim, S. Srinivasan, M.-J. Park, G. Sathiyaraj, Y.-J. Kim, and D.-C. Yang Nocardioides humi sp. nov., a {beta}-glucosidase-producing bacterium isolated from soil of a ginseng field Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2724 - 2728. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
P. Monciardini, L. Cavaletti, A. Ranghetti, P. Schumann, M. Rohde, R. Bamonte, M. Sosio, A. Mezzelani, and S. Donadio Novel members of the family Micromonosporaceae, Rugosimonospora acidiphila gen. nov., sp. nov. and Rugosimonospora africana sp. nov. Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2752 - 2758. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
A. F. Yassin, C. Sproer, H. Hupfer, C. Siering, and H.-P. Klenk Nocardiopsis potens sp. nov., isolated from household waste Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2729 - 2733. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
Y.-H. Xin, Z.-H. Liang, D.-C. Zhang, H.-C. Liu, J.-L. Zhang, Y. Yu, M.-S. Xu, P.-J. Zhou, and Y.-G. Zhou Flavobacterium tiangeerense sp. nov., a cold-living bacterium isolated from a glacier Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2773 - 2777. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. Qin, G.-Z. Zhao, H.-P. Klenk, J. Li, W.-Y. Zhu, L.-H. Xu, and W.-J. Li Nonomuraea antimicrobica sp. nov., an endophytic actinomycete isolated from a leaf of Maytenus austroyunnanensis Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2747 - 2751. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
A. B. Arun, W.-M. Chen, W.-A. Lai, J.-H. Chao, P. D. Rekha, F.-T. Shen, S. Singh, and C.-C. Young Muricauda lutaonensis sp. nov., a moderate thermophile isolated from a coastal hot spring Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2738 - 2742. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
D. Podkopaeva, M. Grabovich, J. Kuever, A. M. Lysenko, T. P. Tourova, T. V. Kolganova, and G. Dubinina Proposal of Spirillum winogradskyi sp. nov., a novel microaerophilic species, an emended description of the genus Spirillum and Request for an Opinion regarding the status of the species Spirillum volutans Ehrenberg 1832 Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2916 - 2920. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
W. Sun, G.-X. Dong, Y.-Q. Zhang, Y.-Z. Wei, Q.-P. Li, L.-Y. Yu, H.-P. Klenk, and Y.-Q. Zhang Actinoplanes sichuanensis sp. nov. and Actinoplanes xinjiangensis sp. nov. Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2763 - 2768. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J.-H. Yoon, S.-J. Kang, S. Park, W. Kim, and T.-K. Oh Nocardioides caeni sp. nov., isolated from wastewater Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2794 - 2797. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J.-H. Yoon, S. Park, S.-J. Kang, Y.-T. Jung, and W. Kim Terrabacter terrigena sp. nov., isolated from soil Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2798 - 2802. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
M. Sakamoto, N. Suzuki, N. Matsunaga, K. Koshihara, M. Seki, H. Komiya, and Y. Benno Parabacteroides gordonii sp. nov., isolated from human blood cultures Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2843 - 2847. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
M. Hamada, T. Iino, T. Tamura, T. Iwami, S. Harayama, and K.-i. Suzuki Serinibacter salmoneus gen. nov., sp. nov., an actinobacterium isolated from the intestinal tract of a fish, and emended descriptions of the families Beutenbergiaceae and Bogoriellaceae Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2809 - 2814. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
Y. Wang, L.-L. Cao, S.-K. Tang, K. Lou, P.-H. Mao, X. Jin, C.-L. Jiang, L.-H. Xu, and W.-J. Li Marinococcus luteus sp. nov., a halotolerant bacterium isolated from a salt lake, and emended description of the genus Marinococcus Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2875 - 2879. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
X.-Q. Zhao, W.-J. Li, W.-C. Jiao, Y. Li, W.-J. Yuan, Y.-Q. Zhang, H.-P. Klenk, J.-W. Suh, and F.-W. Bai Streptomyces xinghaiensis sp. nov., isolated from marine sediment Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2870 - 2874. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
D. W. Lee, J.-E. Lee, and S. D. Lee Chitinophaga rupis sp. nov., isolated from soil Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2830 - 2833. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
Y.-G. Chen, Y.-Q. Zhang, H.-Y. Huang, H.-P. Klenk, S.-K. Tang, K. Huang, Q.-H. Chen, X.-L. Cui, and W.-J. Li Halomonas zhanjiangensis sp. nov., a halophilic bacterium isolated from a sea urchin Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2888 - 2893. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
B. Bouizgarne, B. Lanoot, S. Loqman, C. Sproer, H.-P. Klenk, J. Swings, and Y. Ouhdouch Streptomyces marokkonensis sp. nov., isolated from rhizosphere soil of Argania spinosa L. Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2857 - 2863. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. C. Park, K. S. Baik, D. Kim, and C. N. Seong Maritimimonas rapanae gen. nov., sp. nov., isolated from gut microflora of the veined rapa whelk, Rapana venosa Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2824 - 2829. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
D. P. Labeda, N. P. Price, R. M. Kroppenstedt, J. M. Donahue, N. M. Williams, and S. F. Sells Streptomyces atriruber sp. nov. and Streptomyces silaceus sp. nov., two novel species of equine origin Int J Syst Evol Microbiol, November 1, 2009; 59(11): 2899 - 2903. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
D. Kasai, T. Fujinami, T. Abe, K. Mase, Y. Katayama, M. Fukuda, and E. Masai Uncovering the Protocatechuate 2,3-Cleavage Pathway Genes J. Bacteriol., November 1, 2009; 191(21): 6758 - 6768. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 S. Maillard, B. Gottstein, K. L. Haag, S. Ma, I. Colovic, M. C. Benchikh-Elfegoun, J. Knapp, and R. Piarroux The EmsB Tandemly Repeated Multilocus Microsatellite: a New Tool To Investigate Genetic Diversity of Echinococcus granulosus Sensu Lato J. Clin. Microbiol., November 1, 2009; 47(11): 3608 - 3616. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
O. Peraud, J. S. Biggs, R. W. Hughen, A. R. Light, G. P. Concepcion, B. M. Olivera, and E. W. Schmidt Microhabitats within Venomous Cone Snails Contain Diverse Actinobacteria Appl. Envir. Microbiol., November 1, 2009; 75(21): 6820 - 6826. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J. G. Fox, Z. Shen, S. Muthupalani, A. R. Rogers, S. M. Kirchain, and F. E. Dewhirst Chronic Hepatitis, Hepatic Dysplasia, Fibrosis, and Biliary Hyperplasia in Hamsters Naturally Infected with a Novel Helicobacter Classified in the H. bilis Cluster J. Clin. Microbiol., November 1, 2009; 47(11): 3673 - 3681. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
T. F. Leung, C. Y. Li, W. Y. Lam, G. W. K. Wong, E. Cheuk, M. Ip, P. C. Ng, and P. K. S. Chan Epidemiology and Clinical Presentations of Human Coronavirus NL63 Infections in Hong Kong Children J. Clin. Microbiol., November 1, 2009; 47(11): 3486 - 3492. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 M. Suzuki, Y. Yoto, A. Ishikawa, and H. Tsutsumi Analysis of Nucleotide Sequences of Human Parvovirus B19 Genome Reveals Two Different Modes of Evolution, a Gradual Alteration and a Sudden Replacement: a Retrospective Study in Sapporo, Japan, from 1980 to 2008 J. Virol., November 1, 2009; 83(21): 10975 - 10980. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 A. J. Schmitz, J. M. Glynn, B. J.S.C. Olson, K. D. Stokes, and K. W. Osteryoung Arabidopsis FtsZ2-1 and FtsZ2-2 Are Functionally Redundant, But FtsZ-Based Plastid Division Is Not Essential for Chloroplast Partitioning or Plant Growth and Development Mol Plant, November 1, 2009; 2(6): 1211 - 1222. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 B. Crestanello, E. Pecchioli, C. Vernesi, S. Mona, N. Martinkova, M. Janiga, H. C. Hauffe, and G. Bertorelle The Genetic Impact of Translocations and Habitat Fragmentation in Chamois (Rupicapra) spp. J. Hered., November 1, 2009; 100(6): 691 - 708. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 L. Hellborg and J. Piskur Complex Nature of the Genome in a Wine Spoilage Yeast, Dekkera bruxellensis Eukaryot. Cell, November 1, 2009; 8(11): 1739 - 1749. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 O. Andrianoelina, B. Favreau, L. Ramamonjisoa, and J.-M. Bouvet Small effect of fragmentation on the genetic diversity of Dalbergia monticola, an endangered tree species of the eastern forest of Madagascar, detected by chloroplast and nuclear microsatellites Ann. Bot., November 1, 2009; 104(6): 1231 - 1242. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 T. Yukawa, Y. Ogura-Tsujita, R. P. Shefferson, and J. Yokoyama Mycorrhizal diversity in Apostasia (Orchidaceae) indicates the origin and evolution of orchid mycorrhiza Am. J. Botany, November 1, 2009; 96(11): 1997 - 2009. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J. Castillo, D. Crespo, E. Capilla, M. Diaz, F. Chauvigne, J. Cerda, and J. V. Planas Evolutionary structural and functional conservation of an ortholog of the GLUT2 glucose transporter gene (SLC2A2) in zebrafish Am J Physiol Regulatory Integrative Comp Physiol, November 1, 2009; 297(5): R1570 - R1581. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 N. Gill, S. Findley, J. G. Walling, C. Hans, J. Ma, J. Doyle, G. Stacey, and S. A. Jackson Molecular and Chromosomal Evidence for Allopolyploidy in Soybean Plant Physiology, November 1, 2009; 151(3): 1167 - 1174. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 R. M. Irvine, E. W. Aldous, R. J. Manvell, W. J. Cox, V. Ceeraz, C. M. Fuller, A. M. Wood, J. C. Milne, M. Wilson, R. G. Hepple, et al. Outbreak of Newcastle disease due to pigeon paramyxovirus type 1 in grey partridges (Perdix perdix) in Scotland in October 2006 Vet Rec., October 31, 2009; 165(18): 531 - 535. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
A. Vijaykumar, A. Saini, and N. Jawali Phylogenetic Analysis of Subgenus Vigna Species Using Nuclear Ribosomal RNA ITS: Evidence of Hybridization among Vigna unguiculata Subspecies J. Hered., October 27, 2009; (2009) esp084v1. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 H. S. Moon, J. M. Nifong, J. S. Nicholson, A. Heineman, K. Lion, R. van der Hoeven, A. J. Hayes, and R. S. Lewis Microsatellite-based Analysis of Tobacco (Nicotiana tabacum L.) Genetic Resources Crop Sci., October 22, 2009; 49(6): 2149 - 2159. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
D. Kockelkorn and G. Fuchs Malonic Semialdehyde Reductase, Succinic Semialdehyde Reductase, and Succinyl-Coenzyme A Reductase from Metallosphaera sedula: Enzymes of the Autotrophic 3-Hydroxypropionate/4-Hydroxybutyrate Cycle in Sulfolobales J. Bacteriol., October 15, 2009; 191(20): 6352 - 6362. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
K. Sonoyama, R. Fujiwara, N. Takemura, T. Ogasawara, J. Watanabe, H. Ito, and T. Morita Response of Gut Microbiota to Fasting and Hibernation in Syrian Hamsters Appl. Envir. Microbiol., October 15, 2009; 75(20): 6451 - 6456. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
K. Tatematsu, Y. Tanaka, F. Kurbanov, F. Sugauchi, S. Mano, T. Maeshiro, T. Nakayoshi, M. Wakuta, Y. Miyakawa, and M. Mizokami A Genetic Variant of Hepatitis B Virus Divergent from Known Human and Ape Genotypes Isolated from a Japanese Patient and Provisionally Assigned to New Genotype J J. Virol., October 15, 2009; 83(20): 10538 - 10547. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
T. Tada, A. Altun, and S. Yokoyama Evolutionary replacement of UV vision by violet vision in fish PNAS, October 13, 2009; 106(41): 17457 - 17462. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 S. N. Peirson, S. Halford, and R. G. Foster The evolution of irradiance detection: melanopsin and the non-visual opsins Phil Trans R Soc B, October 12, 2009; 364(1531): 2849 - 2865. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
G. E. Sims, S.-R. Jun, G. A. Wu, and S.-H. Kim Whole-genome phylogeny of mammals: Evolutionary information in genic and nongenic regions PNAS, October 6, 2009; 106(40): 17077 - 17082. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 T. M. Nye Modelling the evolution of multi-gene families Statistical Methods in Medical Research, October 1, 2009; 18(5): 487 - 504. [Abstract] [PDF]
|
|
|
|
|
|
S. Ghosh, N. Kobayashi, S. Nagashima, and T. N. Naik Molecular characterization of full-length genomic segment 2 of a bovine picobirnavirus (PBV) strain: evidence for high genetic diversity with genogroup I PBVs J. Gen. Virol., October 1, 2009; 90(10): 2519 - 2524. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
N. Parkinson, D. Stead, J. Bew, J. Heeney, L. Tsror (Lahkim), and J. Elphinstone Dickeya species relatedness and clade structure determined by comparison of recA sequences Int J Syst Evol Microbiol, October 1, 2009; 59(10): 2388 - 2393. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
L.-P. Chen, H.-Y. Xu, S.-Z. Fu, H.-X. Fan, Y.-G. Zhou, and Z.-P. Liu Lishizhenia tianjinensis sp. nov., isolated from coastal seawater Int J Syst Evol Microbiol, October 1, 2009; 59(10): 2400 - 2403. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
G.-Z. Zhao, J. Li, S. Qin, Y.-Q. Zhang, W.-Y. Zhu, C.-L. Jiang, L.-H. Xu, and W.-J. Li Micrococcus yunnanensis sp. nov., a novel actinobacterium isolated from surface-sterilized Polyspora axillaris roots Int J Syst Evol Microbiol, October 1, 2009; 59(10): 2383 - 2387. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J. H. Lim, S.-H. Baek, and S.-T. Lee Ferruginibacter alkalilentus gen. nov., sp. nov. and Ferruginibacter lapsinanis sp. nov., novel members of the family 'Chitinophagaceae' in the phylum Bacteroidetes, isolated from freshwater sediment Int J Syst Evol Microbiol, October 1, 2009; 59(10): 2394 - 2399. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
A. S. Lamm, A. Khare, P. Conville, P. C. K. Lau, H. Bergeron, and J. P. N. Rosazza Nocardia iowensis sp. nov., an organism rich in biocatalytically important enzymes and nitric oxide synthase Int J Syst Evol Microbiol, October 1, 2009; 59(10): 2408 - 2414. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
X. Guo, X.-Y. You, L.-J. Liu, J.-Y. Zhang, S.-J. Liu, and C.-Y. Jiang Alicyclobacillus aeris sp. nov., a novel ferrous- and sulfur-oxidizing bacterium isolated from a copper mine Int J Syst Evol Microbiol, October 1, 2009; 59(10): 2415 - 2420. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. Qin, G.-Z. Zhao, J. Li, W.-Y. Zhu, L.-H. Xu, and W.-J. Li Actinomadura flavalba sp. nov., an endophytic actinomycete isolated from leaves of Maytenus austroyunnanensis Int J Syst Evol Microbiol, October 1, 2009; 59(10): 2453 - 2457. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
M. Cai, S.-K. Tang, Y.-G. Chen, Y. Li, Y.-Q. Zhang, and W.-J. Li Streptomonospora amylolytica sp. nov. and Streptomonospora flavalba sp. nov., two novel halophilic actinomycetes isolated from a salt lake Int J Syst Evol Microbiol, October 1, 2009; 59(10): 2471 - 2475. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
Y.-X. Wang, J.-H. Liu, X.-X. Zhang, Y.-G. Chen, Z.-G. Wang, Y. Chen, Q.-Y. Li, Q. Peng, and X.-L. Cui Fodinicurvata sediminis gen. nov., sp. nov. and Fodinicurvata fenggangensis sp. nov., poly-{beta}-hydroxybutyrate-producing bacteria in the family Rhodospirillaceae Int J Syst Evol Microbiol, October 1, 2009; 59(10): 2575 - 2581. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
Y.-P. Xiao, W. Hui, Q. Wang, S. W. Roh, X.-Q. Shi, J.-H. Shi, and Z.-X. Quan Pseudomonas caeni sp. nov., a denitrifying bacterium isolated from the sludge of an anaerobic ammonium-oxidizing bioreactor Int J Syst Evol Microbiol, October 1, 2009; 59(10): 2594 - 2598. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
E. Ben-Dov, D. Z. Ben Yosef, V. Pavlov, and A. Kushmaro Corynebacterium maris sp. nov., a marine bacterium isolated from the mucus of the coral Fungia granulosa Int J Syst Evol Microbiol, October 1, 2009; 59(10): 2458 - 2463. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
A. P. Rooney, N. P. J. Price, C. Ehrhardt, J. L. Swezey, and J. D. Bannan Phylogeny and molecular taxonomy of the Bacillus subtilis species complex and description of Bacillus subtilis subsp. inaquosorum subsp. nov. Int J Syst Evol Microbiol, October 1, 2009; 59(10): 2429 - 2436. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S.-Y. Sheu, T. F. Chiu, J.-H. Chou, D.-S. Sheu, A. B. Arun, C.-C. Young, C. A. Chen, J.-T. Wang, and W.-M. Chen Andreprevotia lacus sp. nov., isolated from a fish-culture pond Int J Syst Evol Microbiol, October 1, 2009; 59(10): 2482 - 2485. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S.-Y. Sheu, T. F. Chiu, N.-T. Cho, J.-H. Chou, D.-S. Sheu, A. B. Arun, C.-C. Young, C. A. Chen, J.-T. Wang, and W.-M. Chen Flectobacillus roseus sp. nov., isolated from freshwater in Taiwan Int J Syst Evol Microbiol, October 1, 2009; 59(10): 2546 - 2551. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
C. Sanchez-Porro, M. A. Amoozegar, R. Rohban, M. Hajighasemi, and A. Ventosa Thalassobacillus cyri sp. nov., a moderately halophilic Gram-positive bacterium from a hypersaline lake Int J Syst Evol Microbiol, October 1, 2009; 59(10): 2565 - 2570. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. Qin, J. Li, Y.-Q. Zhang, W.-Y. Zhu, G.-Z. Zhao, L.-H. Xu, and W.-J. Li Plantactinospora mayteni gen. nov., sp. nov., a member of the family Micromonosporaceae Int J Syst Evol Microbiol, October 1, 2009; 59(10): 2527 - 2533. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
Y.-G. Chen, Y.-Q. Zhang, Z.-X. Liu, D.-C. Zhuang, H.-P. Klenk, S.-K. Tang, X.-L. Cui, and W.-J. Li Halobacillus salsuginis sp. nov., a moderately halophilic bacterium from a subterranean brine Int J Syst Evol Microbiol, October 1, 2009; 59(10): 2505 - 2509. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J. Xiao, Y. Wang, Y. Luo, S.-J. Xie, J.-S. Ruan, and J. Xu Streptomyces avicenniae sp. nov., a novel actinomycete isolated from the rhizosphere of the mangrove plant Avicennia mariana Int J Syst Evol Microbiol, October 1, 2009; 59(10): 2624 - 2628. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J.-H. Chou, Y.-J. Chou, A. B. Arun, C.-C. Young, C. A. Chen, J.-T. Wang, and W.-M. Chen Vogesella lacus sp. nov., isolated from a soft-shell turtle culture pond Int J Syst Evol Microbiol, October 1, 2009; 59(10): 2629 - 2632. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
M. A. Mullins, K. B. Register, D. O. Bayles, C. L. Loving, T. L. Nicholson, S. L. Brockmeier, D. W. Dyer, and G. J. Phillips Characterization and Comparative Analysis of the Genes Encoding Haemophilus parasuis Outer Membrane Proteins P2 and P5 J. Bacteriol., October 1, 2009; 191(19): 5988 - 6002. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
O. O. Lee, P. Y. Chui, Y. H. Wong, J. R. Pawlik, and P.-Y. Qian Evidence for Vertical Transmission of Bacterial Symbionts from Adult to Embryo in the Caribbean Sponge Svenzea zeai Appl. Envir. Microbiol., October 1, 2009; 75(19): 6147 - 6156. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. Qin, J. Li, H.-H. Chen, G.-Z. Zhao, W.-Y. Zhu, C.-L. Jiang, L.-H. Xu, and W.-J. Li Isolation, Diversity, and Antimicrobial Activity of Rare Actinobacteria from Medicinal Plants of Tropical Rain Forests in Xishuangbanna, China Appl. Envir. Microbiol., October 1, 2009; 75(19): 6176 - 6186. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 M. Teramoto, M. Suzuki, F. Okazaki, A. Hatmanti, and S. Harayama Oceanobacter-related bacteria are important for the degradation of petroleum aliphatic hydrocarbons in the tropical marine environment Microbiology, October 1, 2009; 155(10): 3362 - 3370. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
L. Liu, L. Yu, D. K. Pearl, and S. V. Edwards Estimating Species Phylogenies Using Coalescence Times among Sequences Syst Biol, October 1, 2009; 58(5): 468 - 477. [Abstract] [Full Text] [PDF]
|
|