Molecular Biology and Evolution, Vol 14, 195-199, Copyright © 1997 by Society for Molecular Biology and Evolution
YX Fu and WH Li
We present a simple Monte Carlo method for estimating the age of the most
recent common ancestor (MRCA) of a sample of DNA sequences. We show that
Templeton's (1993) estimator of the age of the MRCA based on the maximum
number of nucleotide differences between two sequences in a sample is
inaccurate, and we demonstrate the new method by reanalyzing a sample of
DNA sequences from human Y chromosomes and a sample of human Alu sequences.
ORIGINAL ARTICLE
Estimating the age of the common ancestor of a sample of DNA sequences
Human Genetics Center, School of Public Health, University of Texas at Houston 77225, USA. fu@hgc.sph.uth.tmc.edu
![]()
CiteULike
Connotea
Del.icio.us What's this?
This article has been cited by other articles:
![]() |
M. G. B. Blum and N. A. Rosenberg Estimating the Number of Ancestral Lineages Using a Maximum-Likelihood Method Based on Rejection Sampling Genetics, July 1, 2007; 176(3): 1741 - 1757. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. C. Leman, Y. Chen, J. E. Stajich, M. A. F. Noor, and M. K. Uyenoyama Likelihoods From Summary Statistics: Recent Divergence Between Species Genetics, November 1, 2005; 171(3): 1419 - 1436. [Abstract] [Full Text] [PDF] |
||||
![]() |
A. D. Yoder, L. E. Olson, C. Hanley, K. L. Heckman, R. Rasoloarison, A. L. Russell, J. Ranivo, V. Soarimalala, K. P. Karanth, A. P. Raselimanana, et al. A multidimensional approach for detecting species patterns in Malagasy vertebrates PNAS, May 3, 2005; 102(suppl_1): 6587 - 6594. [Abstract] [Full Text] [PDF] |
||||
![]() |
G. Hamilton, M. Currat, N. Ray, G. Heckel, M. Beaumont, and L. Excoffier Bayesian Estimation of Recent Migration Rates After a Spatial Expansion Genetics, May 1, 2005; 170(1): 409 - 417. [Abstract] [Full Text] [PDF] |
||||
![]() |
L. Excoffier, A. Estoup, and J.-M. Cornuet Bayesian Analysis of an Admixture Model With Mutations and Arbitrarily Linked Markers Genetics, March 1, 2005; 169(3): 1727 - 1738. [Abstract] [Full Text] [PDF] |
||||
![]() |
D. A. Tallmon, G. Luikart, and M. A. Beaumont Comparative Evaluation of a New Effective Population Size Estimator Based on Approximate Bayesian Computation Genetics, June 1, 2004; 167(2): 977 - 988. [Abstract] [Full Text] [PDF] |
||||
![]() |
P. Marjoram, J. Molitor, V. Plagnol, and S. Tavare Markov chain Monte Carlo without likelihoods PNAS, December 23, 2003; 100(26): 15324 - 15328. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. A. Beaumont, W. Zhang, and D. J. Balding Approximate Bayesian Computation in Population Genetics Genetics, December 1, 2002; 162(4): 2025 - 2035. [Abstract] [Full Text] [PDF] |
||||
![]() |
K. D. Makova, M. Ramsay, T. Jenkins, and W.-H. Li Human DNA Sequence Variation in a 6.6-kb Region Containing the Melanocortin 1 Receptor Promoter Genetics, July 1, 2001; 158(3): 1253 - 1268. [Abstract] [Full Text] [PDF] |
||||
![]() |
N. Yu, Z. Zhao, Y.-X. Fu, N. Sambuughin, M. Ramsay, T. Jenkins, E. Leskinen, L. Patthy, L. B. Jorde, T. Kuromori, et al. Global Patterns of Human DNA Sequence Variation in a 10-kb Region on Chromosome 1 Mol. Biol. Evol., February 1, 2001; 18(2): 214 - 222. [Abstract] [Full Text] |
||||
![]() |
Z. Zhao, L. Jin, Y.-X. Fu, M. Ramsay, T. Jenkins, E. Leskinen, P. Pamilo, M. Trexler, L. Patthy, L. B. Jorde, et al. Worldwide DNA sequence variation in a 10-kb noncoding region on human chromosome 22 PNAS, September 22, 2000; (2000) 200348197. [Abstract] [Full Text] |
||||
![]() |
J. D. Wall Detecting Ancient Admixture in Humans Using Sequence Polymorphism Data Genetics, March 1, 2000; 154(3): 1271 - 1279. [Abstract] [Full Text] |
||||
![]() |
J. Hawks, K. Hunley, S.-H. Lee, and M. Wolpoff Population Bottlenecks and Pleistocene Human Evolution Mol. Biol. Evol., January 1, 2000; 17(1): 2 - 22. [Abstract] [Full Text] [PDF] |
||||
![]() |
J. D. Wall A Comparison of Estimators of the Population Recombination Rate Mol. Biol. Evol., January 1, 2000; 17(1): 156 - 163. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. W. Nachman, V. L. Bauer, S. L. Crowell, and C. F. Aquadro DNA Variability and Recombination Rates at X-Linked Loci in Humans Genetics, November 1, 1998; 150(3): 1133 - 1141. [Abstract] [Full Text] |
||||
![]() |
P. A. Underhill, L. Jin, A. A. Lin, S. Q. Mehdi, T. Jenkins, D. Vollrath, R. W. Davis, L. L. Cavalli-Sforza, and P. J. Oefner Detection of Numerous Y Chromosome Biallelic Polymorphisms by Denaturing High-Performance Liquid Chromatography Genome Res., October 1, 1997; 7(10): 996 - 1005. [Abstract] [Full Text] [PDF] |
||||
![]() |
Z. Zhao, L. Jin, Y.-X. Fu, M. Ramsay, T. Jenkins, E. Leskinen, P. Pamilo, M. Trexler, L. Patthy, L. B. Jorde, et al. Worldwide DNA sequence variation in a 10-kilobase noncoding region on human chromosome 22 PNAS, October 10, 2000; 97(21): 11354 - 11358. [Abstract] [Full Text] [PDF] |
||||



