Molecular Biology and Evolution, Vol 10, 512-526, Copyright © 1993 by Society for Molecular Biology and Evolution
K Tamura and M Nei
Examining the pattern of nucleotide substitution for the control region of
mitochondrial DNA (mtDNA) in humans and chimpanzees, we developed a new
mathematical method for estimating the number of transitional and
transversional substitutions per site, as well as the total number of
nucleotide substitutions. In this method, excess transitions, unequal
nucleotide frequencies, and variation of substitution rate among different
sites are all taken into account. Application of this method to human and
chimpanzee data suggested that the transition/transversion ratio for the
entire control region was approximately 15 and nearly the same for the two
species. The 95% confidence interval of the age of the common ancestral
mtDNA was estimated to be 80,000-480,000 years in humans and 0.57-2.72 Myr
in common chimpanzees.
ORIGINAL ARTICLE
Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees
Department of Biology, Pennsylvania State University.
CiteULike 
Connotea 
Del.icio.us What's this?
This article has been cited by other articles:
|
|
 |
|
  P. Gomez, R. N. Sempere, S. F. Elena, and M. A. Aranda Mixed Infections of Pepino Mosaic Virus Strains Modulate the Evolutionary Dynamics of this Emergent Virus J. Virol., December 1, 2009; 83(23): 12378 - 12387. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 J. Wu and E. Susko General Heterotachy and Distance Method Adjustments Mol. Biol. Evol., December 1, 2009; 26(12): 2689 - 2697. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 M. J. Phillips, G. C. Gibb, E. A. Crimp, and D. Penny Tinamous and Moa Flock Together: Mitochondrial Genome Sequence Analysis Reveals Independent Losses of Flight among Ratites Syst Biol, November 13, 2009; (2009) syp079v1. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 B. Crestanello, E. Pecchioli, C. Vernesi, S. Mona, N. Martinkova, M. Janiga, H. C. Hauffe, and G. Bertorelle The Genetic Impact of Translocations and Habitat Fragmentation in Chamois (Rupicapra) spp. J. Hered., November 1, 2009; 100(6): 691 - 708. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
A. M. Runck, H. Moriyama, and J. F. Storz Evolution of Duplicated {beta}-Globin Genes and the Structural Basis of Hemoglobin Isoform Differentiation in Mus Mol. Biol. Evol., November 1, 2009; 26(11): 2521 - 2532. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 F. Balloux, L.-J. L. Handley, T. Jombart, H. Liu, and A. Manica Climate shaped the worldwide distribution of human mitochondrial DNA sequence variation Proc R Soc B, October 7, 2009; 276(1672): 3447 - 3455. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 A. P. Rooney, N. P. J. Price, C. Ehrhardt, J. L. Swezey, and J. D. Bannan Phylogeny and molecular taxonomy of the Bacillus subtilis species complex and description of Bacillus subtilis subsp. inaquosorum subsp. nov. Int J Syst Evol Microbiol, October 1, 2009; 59(10): 2429 - 2436. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
M. Maraun, G. Erdmann, G. Schulz, R. A. Norton, S. Scheu, and K. Domes Multiple convergent evolution of arboreal life in oribatid mites indicates the primacy of ecology Proc R Soc B, September 22, 2009; 276(1671): 3219 - 3227. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
T. D. Niederberger, B. Steven, S. Charvet, B. Barbier, and L. G. Whyte Virgibacillus arcticus sp. nov., a moderately halophilic, endospore-forming bacterium from permafrost in the Canadian high Arctic Int J Syst Evol Microbiol, September 1, 2009; 59(9): 2219 - 2225. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 S. Giokas, D. Thomaz, V. Douris, R. lecanidou, and G. C. Rodakis 5000 YEARS OF MOLECULAR EVOLUTION IN A POPULATION OF THE LAND SNAIL ALBINARIA CAERULEA TRANSPORTED BY HUMANS J. Mollus. Stud., August 18, 2009; (2009) eyp041v1. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 M. A. Olson, R. N. Zajac, and M. A. Russello Estuarine-Scale Genetic Variation in the Polychaete Hobsonia florida (Ampharetidae; Annelida) in Long Island Sound and Relationships to Pleistocene Glaciations Biol. Bull., August 1, 2009; 217(1): 86 - 94. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. Guirao-Rico and M. Aguade Positive Selection Has Driven the Evolution of the Drosophila Insulin-Like Receptor (InR) at Different Timescales Mol. Biol. Evol., August 1, 2009; 26(8): 1723 - 1732. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
W. Fletcher and Z. Yang INDELible: A Flexible Simulator of Biological Sequence Evolution Mol. Biol. Evol., August 1, 2009; 26(8): 1879 - 1888. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 G. Fourie, E. T. Steenkamp, T. R. Gordon, and A. Viljoen Evolutionary Relationships among the Fusarium oxysporum f. sp. cubense Vegetative Compatibility Groups Appl. Envir. Microbiol., July 15, 2009; 75(14): 4770 - 4781. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
H.-S. Kim, B. Ma, N. T. Perna, and A. O. Charkowski Phylogeny and Virulence of Naturally Occurring Type III Secretion System-Deficient Pectobacterium Strains Appl. Envir. Microbiol., July 1, 2009; 75(13): 4539 - 4549. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
K. Hommola, J. E. Smith, Y. Qiu, and W. R. Gilks A Permutation Test of Host-Parasite Cospeciation Mol. Biol. Evol., July 1, 2009; 26(7): 1457 - 1468. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
T.-K. Seo and H. Kishino Statistical Comparison of Nucleotide, Amino Acid, and Codon Substitution Models for Evolutionary Analysis of Protein-Coding Sequences Syst Biol, June 29, 2009; (2009) syp015v1. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 C. J. Pink, S. K. Swaminathan, I. Dunham, J. Rogers, A. Ward, and L. D. Hurst Evidence That Replication-Associated Mutation Alone Does Not Explain Between-Chromosome Differences In Substitution Rates Gen Biol Evol, June 22, 2009; 2009(0): 13 - 22. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 C. R. Haag, S. J. McTaggart, A. Didier, T. J. Little, and D. Charlesworth Nucleotide Polymorphism and Within-Gene Recombination in Daphnia magna and D. pulex, Two Cyclical Parthenogens Genetics, May 1, 2009; 182(1): 313 - 323. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J. D. O'Brien, V. N. Minin, and M. A. Suchard Learning to Count: Robust Estimates for Labeled Distances between Molecular Sequences Mol. Biol. Evol., April 1, 2009; 26(4): 801 - 814. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. Subramanian Temporal Trails of Natural Selection in Human Mitogenomes Mol. Biol. Evol., April 1, 2009; 26(4): 715 - 717. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
R. A. Medina, F. Torres-Perez, H. Galeno, M. Navarrete, P. A. Vial, R. E. Palma, M. Ferres, J. A. Cook, and B. Hjelle Ecology, Genetic Diversity, and Phylogeographic Structure of Andes Virus in Humans and Rodents in Chile J. Virol., March 15, 2009; 83(6): 2446 - 2459. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
X.-Y. Zhi, W.-J. Li, and E. Stackebrandt An update of the structure and 16S rRNA gene sequence-based definition of higher ranks of the class Actinobacteria, with the proposal of two new suborders and four new families and emended descriptions of the existing higher taxa Int J Syst Evol Microbiol, March 1, 2009; 59(3): 589 - 608. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
V. Geffroy, C. Macadre, P. David, A. Pedrosa-Harand, M. Sevignac, C. Dauga, and T. Langin Molecular Analysis of a Large Subtelomeric Nucleotide-Binding-Site-Leucine-Rich-Repeat Family in Two Representative Genotypes of the Major Gene Pools of Phaseolus vulgaris Genetics, February 1, 2009; 181(2): 405 - 419. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
G. Tezanos-Pinto, C. S. Baker, K. Russell, K. Martien, R. W. Baird, A. Hutt, G. Stone, A. A. Mignucci-Giannoni, S. Caballero, T. Endo, et al. A Worldwide Perspective on the Population Structure and Genetic Diversity of Bottlenose Dolphins (Tursiops truncatus) in New Zealand J. Hered., January 1, 2009; 100(1): 11 - 24. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
B. M. Henn, C. R. Gignoux, M. W. Feldman, and J. L. Mountain Characterizing the Time Dependency of Human Mitochondrial DNA Mutation Rate Estimates Mol. Biol. Evol., January 1, 2009; 26(1): 217 - 230. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 J. P Huelsenbeck, P. Joyce, C. Lakner, and F. Ronquist Bayesian analysis of amino acid substitution models Phil Trans R Soc B, December 27, 2008; 363(1512): 3941 - 3953. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
M. T Holder, D. J Zwickl, and C. Dessimoz Evaluating the robustness of phylogenetic methods to among-site variability in substitution processes Phil Trans R Soc B, December 27, 2008; 363(1512): 4013 - 4021. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
F. Squartini and P. F. Arndt Quantifying the Stationarity and Time Reversibility of the Nucleotide Substitution Process Mol. Biol. Evol., December 1, 2008; 25(12): 2525 - 2535. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
T. X. Han, L. L. Han, L. J. Wu, W. F. Chen, X. H. Sui, J. G. Gu, E. T. Wang, and W. X. Chen Mesorhizobium gobiense sp. nov. and Mesorhizobium tarimense sp. nov., isolated from wild legumes growing in desert soils of Xinjiang, China Int J Syst Evol Microbiol, November 1, 2008; 58(11): 2610 - 2618. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 I. S. Druzhinina, M. Komon-Zelazowska, L. Kredics, L. Hatvani, Z. Antal, T. Belayneh, and C. P. Kubicek Alternative reproductive strategies of Hypocrea orientalis and genetically close but clonal Trichoderma longibrachiatum, both capable of causing invasive mycoses of humans Microbiology, November 1, 2008; 154(11): 3447 - 3459. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. Rosset, R. S. Wells, D. F. Soria-Hernanz, C. Tyler-Smith, A. K. Royyuru, D. M. Behar, and and The Genographic Consortium Maximum-Likelihood Estimation of Site-Specific Mutation Rates in Human Mitochondrial DNA From Partial Phylogenetic Classification Genetics, November 1, 2008; 180(3): 1511 - 1524. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
I. Luque, M. L. Riera-Alberola, A. Andujar, and J. A. G. Ochoa de Alda Intraphylum Diversity and Complex Evolution of Cyanobacterial Aminoacyl-tRNA Synthetases Mol. Biol. Evol., November 1, 2008; 25(11): 2369 - 2389. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 N. Poulakakis, S. Glaberman, M. Russello, L. B. Beheregaray, C. Ciofi, J. R. Powell, and A. Caccone From the Cover: Historical DNA analysis reveals living descendants of an extinct species of Galapagos tortoise PNAS, October 7, 2008; 105(40): 15464 - 15469. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 T. C. Glenn, J. O. French, T. J. Heincelman, K. L. Jones, and R. H. Sawyer Evolutionary relationships among copies of feather beta ({beta}) keratin genes from several avian orders Integr. Comp. Biol., October 1, 2008; 48(4): 463 - 475. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
G. Baele, Y. Van de Peer, and S. Vansteelandt A Model-Based Approach to Study Nearest-Neighbor Influences Reveals Complex Substitution Patterns in Non-coding Sequences Syst Biol, October 1, 2008; 57(5): 675 - 692. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
E. Borenstein, M. Kupiec, M. W. Feldman, and E. Ruppin Large-scale reconstruction and phylogenetic analysis of metabolic environments PNAS, September 23, 2008; 105(38): 14482 - 14487. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 H. Evans, T. De Tomaso, M. Quail, J. Rogers, A. Y. Gracey, A. R. Cossins, and M. Berenbrink Ancient and modern duplication events and the evolution of stearoyl-CoA desaturases in teleost fishes Physiol Genomics, September 17, 2008; 35(1): 18 - 29. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 I. Ehrmann, C. Dalgliesh, A. Tsaousi, M. P. Paronetto, B. Heinrich, R. Kist, P. Cairns, W. Li, C. Mueller, M. Jackson, et al. Haploinsufficiency of the germ cell-specific nuclear RNA binding protein hnRNP G-T prevents functional spermatogenesis in the mouse Hum. Mol. Genet., September 15, 2008; 17(18): 2803 - 2818. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. Dupas, C. W. Gitau, A. Branca, B. P. Le Ru, and J.-F. Silvain Evolution of a Polydnavirus Gene in Relation to Parasitoid-Host Species Immune Resistance J. Hered., September 1, 2008; 99(5): 491 - 499. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. L. Kosakovsky Pond, A. F.Y. Poon, A. J. Leigh Brown, and S. D.W. Frost A Maximum Likelihood Method for Detecting Directional Evolution in Protein Sequences and Its Application to Influenza A Virus Mol. Biol. Evol., September 1, 2008; 25(9): 1809 - 1824. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 K. Germain, B. Croise, and S. Valas Field evaluation of a gag/env heteroduplex mobility assay for genetic subtyping of small-ruminant lentiviruses J. Gen. Virol., August 1, 2008; 89(8): 2020 - 2028. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
T. X. Han, E. T. Wang, L. J. Wu, W. F. Chen, J. G. Gu, C. T. Gu, C. F. Tian, and W. X. Chen Rhizobium multihospitium sp. nov., isolated from multiple legume species native of Xinjiang, China Int J Syst Evol Microbiol, July 1, 2008; 58(7): 1693 - 1699. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
D. Posada jModelTest: Phylogenetic Model Averaging Mol. Biol. Evol., July 1, 2008; 25(7): 1253 - 1256. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
B. Steven, M. Q. Chen, C. W. Greer, L. G. Whyte, and T. D. Niederberger Tumebacillus permanentifrigoris gen. nov., sp. nov., an aerobic, spore-forming bacterium isolated from Canadian high Arctic permafrost Int J Syst Evol Microbiol, June 1, 2008; 58(6): 1497 - 1501. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
M. Dohrmann, D. Janussen, J. Reitner, A. G. Collins, and G. Worheide Phylogeny and Evolution of Glass Sponges (Porifera, Hexactinellida) Syst Biol, June 1, 2008; 57(3): 388 - 405. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J. Jorba, R. Campagnoli, L. De, and O. Kew Calibration of Multiple Poliovirus Molecular Clocks Covering an Extended Evolutionary Range J. Virol., May 1, 2008; 82(9): 4429 - 4440. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
T.-K. Seo Calculating Bootstrap Probabilities of Phylogeny Using Multilocus Sequence Data Mol. Biol. Evol., May 1, 2008; 25(5): 960 - 971. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 J. Varga, J. Houbraken, H. A. L. Van Der Lee, P. E. Verweij, and R. A. Samson Aspergillus calidoustus sp. nov., Causative Agent of Human Infections Previously Assigned to Aspergillus ustus Eukaryot. Cell, April 1, 2008; 7(4): 630 - 638. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
R. L. Hunter and K. M. Halanych Evaluating Connectivity in the Brooding Brittle Star Astrotoma agassizii across the Drake Passage in the Southern Ocean J. Hered., March 1, 2008; 99(2): 137 - 148. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
C. M. Lewis Jr and J. C. Long Native South American Genetic Structure and Prehistory Inferred from Hierarchical Modeling of mtDNA Mol. Biol. Evol., March 1, 2008; 25(3): 478 - 486. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 R.A Campbell, N.J Gales, G.M Lento, and C.S Baker Islands in the sea: extreme female natal site fidelity in the Australian sea lion, Neophoca cinerea Biol Lett, February 23, 2008; 4(1): 139 - 142. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 J. D.S. Witt, D. L. Threloff, and P. D.N. Hebert Genetic zoogeography of the Hyalella azteca species complex in the Great Basin: Rapid rates of molecular diversification in desert springs Geological Society of America Special Papers, January 1, 2008; 439(0): 103 - 114. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J. E. Spencer, G. R. Smith, and T. E. Dowling Middle to late Cenozoic geology, hydrography, and fish evolution in the American Southwest Geological Society of America Special Papers, January 1, 2008; 439(0): 279 - 299. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
G. R. Smith and T. E. Dowling Correlating hydrographic events and divergence times of speckled dace (Rhinichthys: Teleostei: Cyprinidae) in the Colorado River drainage Geological Society of America Special Papers, January 1, 2008; 439(0): 301 - 317. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 A. Mirand, C. Henquell, C. Archimbaud, M. Chambon, F. Charbonne, H. Peigue-Lafeuille, and J.-L. Bailly Prospective Identification of Enteroviruses Involved in Meningitis in 2006 through Direct Genotyping in Cerebrospinal Fluid J. Clin. Microbiol., January 1, 2008; 46(1): 87 - 96. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 C. R. Grunig, A. Duo, T. N. Sieber, and O. Holdenrieder Assignment of species rank to six reproductively isolated cryptic species of the Phialocephala fortinii s.l.-Acephala applanata species complex Mycologia, January 1, 2008; 100(1): 47 - 67. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
H. Takahashi, A. Kamiya, A. Ishiguro, A. C. Suzuki, N. Saitou, A. Toyoda, and J. Aruga Conservation and Diversification of Msx Protein in Metazoan Evolution Mol. Biol. Evol., January 1, 2008; 25(1): 69 - 82. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
A. F. Y. Poon, S. L. Kosakovsky Pond, D. D. Richman, and S. D. W. Frost Mapping Protease Inhibitor Resistance to Human Immunodeficiency Virus Type 1 Sequence Polymorphisms within Patients J. Virol., December 15, 2007; 81(24): 13598 - 13607. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
M. K. Fujita, J. L. Boore, and C. Moritz Multiple Origins and Rapid Evolution of Duplicated Mitochondrial Genes in Parthenogenetic Geckos (Heteronotia binoei; Squamata, Gekkonidae) Mol. Biol. Evol., December 1, 2007; 24(12): 2775 - 2786. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J. Nuytinck, A. Verbeken, and S. L. Miller Worldwide phylogeny of Lactarius section Deliciosi inferred from ITS and glyceraldehyde-3-phosphate dehydrogenase gene sequences. Mycologia, November 1, 2007; 99(6): 820 - 832. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
D. T. Gerrard and A. Meyer Positive Selection and Gene Conversion in SPP120, a Fertilization-Related Gene, during the East African Cichlid Fish Radiation Mol. Biol. Evol., October 1, 2007; 24(10): 2286 - 2297. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
R. Lanfear, J. A. Thomas, J. J. Welch, T. Brey, and L. Bromham Metabolic rate does not calibrate the molecular clock PNAS, September 25, 2007; 104(39): 15388 - 15393. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
T. Smura, S. Blomqvist, A. Paananen, T. Vuorinen, Z. Sobotova, V. Bubovica, O. Ivanova, T. Hovi, and M. Roivainen Enterovirus surveillance reveals proposed new serotypes and provides new insight into enterovirus 5'-untranslated region evolution J. Gen. Virol., September 1, 2007; 88(9): 2520 - 2526. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
K. T. Zlateva, L. Vijgen, N. Dekeersmaeker, C. Naranjo, and M. Van Ranst Subgroup Prevalence and Genotype Circulation Patterns of Human Respiratory Syncytial Virus in Belgium during Ten Successive Epidemic Seasons J. Clin. Microbiol., September 1, 2007; 45(9): 3022 - 3030. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 M. Verdu and J. Climent Evolutionary correlations of polycyclic shoot growth in Acer (Sapindaceae) Am. J. Botany, August 1, 2007; 94(8): 1316 - 1320. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
H. E. Driscoll and D. S. Barrington Origin of Hawaiian Polystichum (Dryopteridaceae) in the context of a world phylogeny Am. J. Botany, August 1, 2007; 94(8): 1413 - 1424. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
D. Nasri, L. Bouslama, S. Omar, H. Saoudin, T. Bourlet, M. Aouni, B. Pozzetto, and S. Pillet Typing of Human Enterovirus by Partial Sequencing of VP2 J. Clin. Microbiol., August 1, 2007; 45(8): 2370 - 2379. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
P. R. Teske, N. P. Barker, and C. D. McQuaid Lack of genetic differentiation among four sympatric southeast African intertidal limpets (Siphonariidae): phenotypic plasticity in a single species? J. Mollus. Stud., August 1, 2007; 73(3): 223 - 228. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
X. Maside and B. Charlesworth Patterns of Molecular Variation and Evolution in Drosophila americana and Its Relatives Genetics, August 1, 2007; 176(4): 2293 - 2305. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
K. Tamura, J. Dudley, M. Nei, and S. Kumar MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0 Mol. Biol. Evol., August 1, 2007; 24(8): 1596 - 1599. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
C. Matsuba, J. U. Palo, S. L. Kuzmin, and J. Merila Evidence for Multiple Retroposition Events and Gene Evolution in the ADP/ATP Translocase Gene Family in Ranid Frogs J. Hered., July 19, 2007; (2007) esm038v1. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
M. G. B. Blum and N. A. Rosenberg Estimating the Number of Ancestral Lineages Using a Maximum-Likelihood Method Based on Rejection Sampling Genetics, July 1, 2007; 176(3): 1741 - 1757. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. Zarate, S. L. K. Pond, P. Shapshak, and S. D. W. Frost Comparative Study of Methods for Detecting Sequence Compartmentalization in Human Immunodeficiency Virus Type 1 J. Virol., June 15, 2007; 81(12): 6643 - 6651. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
V. Gowri-Shankar and M. Rattray A Reversible Jump Method for Bayesian Phylogenetic Inference with a Nonhomogeneous Substitution Model Mol. Biol. Evol., June 1, 2007; 24(6): 1286 - 1299. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
G. Pisoni, G. Bertoni, M. Puricelli, M. Maccalli, and P. Moroni Demonstration of Coinfection with and Recombination by Caprine Arthritis-Encephalitis Virus and Maedi-Visna Virus in Naturally Infected Goats J. Virol., May 15, 2007; 81(10): 4948 - 4955. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
K. Domes, R. A. Norton, M. Maraun, and S. Scheu Reevolution of sexuality breaks Dollo's law PNAS, April 24, 2007; 104(17): 7139 - 7144. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
G. de Souza Trindade, B. P. Drumond, M. I. M. C. Guedes, J. A. Leite, B. E. F. Mota, M. A. Campos, F. G. da Fonseca, M. L. Nogueira, Z. I. P. Lobato, C. A. Bonjardim, et al. Zoonotic Vaccinia Virus Infection in Brazil: Clinical Description and Implications for Health Professionals J. Clin. Microbiol., April 1, 2007; 45(4): 1370 - 1372. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
B. C. Emerson Alarm Bells for the Molecular Clock? No Support for Ho et al.'s Model of Time-Dependent Molecular Rate Estimates Syst Biol, April 1, 2007; 56(2): 337 - 345. [Full Text] [PDF]
|
|
|
|
|
|
T. P. Smura, N. Junttila, S. Blomqvist, H. Norder, S. Kaijalainen, A. Paananen, L. O. Magnius, T. Hovi, and M. Roivainen Enterovirus 94, a proposed new serotype in human enterovirus species D J. Gen. Virol., March 1, 2007; 88(3): 849 - 858. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
Y. Zhou, H. Ushijima, and T. K. Frey Genomic analysis of diverse rubella virus genotypes J. Gen. Virol., March 1, 2007; 88(3): 932 - 941. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
C. A. Machado, T. S. Haselkorn, and M. A. F. Noor Evaluation of the Genomic Extent of Effects of Fixed Inversion Differences on Intraspecific Variation and Interspecific Gene Flow in Drosophila pseudoobscura and D. persimilis Genetics, March 1, 2007; 175(3): 1289 - 1306. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J. R. S. Meadows, I. Cemal, O. Karaca, E. Gootwine, and J. W. Kijas Five Ovine Mitochondrial Lineages Identified From Sheep Breeds of the Near East Genetics, March 1, 2007; 175(3): 1371 - 1379. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
M. K. Gonder, H. M. Mortensen, F. A. Reed, A. de Sousa, and S. A. Tishkoff Whole-mtDNA Genome Sequence Analysis of Ancient African Lineages Mol. Biol. Evol., March 1, 2007; 24(3): 757 - 768. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
I. M. Chelo, L. Ze-Ze, and R. Tenreiro Congruence of evolutionary relationships inside the Leuconostoc-Oenococcus-Weissella clade assessed by phylogenetic analysis of the 16S rRNA gene, dnaA, gyrB, rpoC and dnaK Int J Syst Evol Microbiol, February 1, 2007; 57(2): 276 - 286. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
R. J. P. Brown, A. W. Tarr, C. P. McClure, V. S. Juttla, N. Tagiuri, W. L. Irving, and J. K. Ball Cross-genotype characterization of genetic diversity and molecular adaptation in hepatitis C virus envelope glycoprotein genes J. Gen. Virol., February 1, 2007; 88(2): 458 - 469. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
P. J. Krug, R. A. Ellingson, R. Burton, and A. Valdes A new poecilogonous species of sea slug (Opisthobranchia: Sacoglossa) from California: comparison with the planktotrophic congener Alderia modesta (Loven, 1844) J. Mollus. Stud., February 1, 2007; 73(1): 29 - 38. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 S. Rosset Efficient inference on known phylogenetic trees using Poisson regression Bioinformatics, January 15, 2007; 23(2): e142 - e147. [Abstract] [Full Text] [PDF]
|
|